BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019B07SP1|AL427437
(692 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig924 858 0.0
>3x_Contig924
Length = 2007
Score = 858 bits (421), Expect = 0.0
Identities = 441/459 (96%)
Strand = Plus / Plus
Query: 21 gaataataaatatttagtctcttaatttatatatatatatdaagagagatataatctttt 80
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 780 gaataataaatatttagtctcttaatttatatatatatattaagagagatataatctttt 839
Query: 81 tatttttcatatcaacattgttatatcttttctaattaacttaagttaaactatttcctt 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 tatttttcatatcaacattgttatatcttttctaattaacttaagttaaactatttcctt 899
Query: 141 tgkttcaatatttttkatttatactaataaaatatgattatktatkaattaakkccckgc 200
|| |||||||||||| ||||||||||||||||||||||||| ||| |||||| ||| ||
Sbjct: 900 tgtttcaatattttttatttatactaataaaatatgattatttattaattaattccctgc 959
Query: 201 gcgactcacccaaccctttatgagggtcgggtgatgtcgcgcagggtttagatatttttt 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 gcgactcacccaaccctttatgagggtcgggtgatgtcgcgcagggtttagatatttttt 1019
Query: 261 taatatataakbbkkgttcttcatttaaaggtttattttgtttataataatttattacat 320
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 taatatataatttttgttcttcatttaaaggtttattttgtttataataatttattacat 1079
Query: 321 gaanaaattnatctaaactattagatttatcagataataaaggatattctttaaaataat 380
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1080 gaataaatttatctaaactattagatttatcagataataaaggatattctttaaaataat 1139
Query: 381 ttaaaataaaaatacaattatttaatcctgaaattcataattgtcaattatcatctttag 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1140 ttaaaataaaaatacaattatttaatcctgaaattcataattgtcaattatcatctttag 1199
Query: 441 aattagaataaactttaccaatattttkkkcactattaa 479
||||||||||||||||||||||||||| |||||||||
Sbjct: 1200 aattagaataaactttaccaatatttttttcactattaa 1238
Score = 287 bits (141), Expect = 2e-77
Identities = 166/183 (90%)
Strand = Plus / Plus
Query: 510 caanaaanaaatknraaagangtkctaatacatatttakkaacaatatgtttttgactta 569
||| ||| |||| ||| | || |||||||||||||| ||||||||||||||||||||
Sbjct: 1269 caataaataaatttaaaatatgttctaatacatatttattaacaatatgtttttgactta 1328
Query: 570 atgcatatravartckaggtgtatttttattatctttgaragaaatatcaaaacaacctt 629
|||||||| | | || ||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 1329 atgcatataaaaatctaggtgtatttttattatcttttaaagaaatatcaaaacaacctt 1388
Query: 630 cagcatcagtaaatccagataatcaataatcatttaaagtaggtaatttacaataatttt 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1389 cagcatcagtaaatccagataatcaataatcatttaaagtaggtaatttacaataatttt 1448
Query: 690 kta 692
||
Sbjct: 1449 tta 1451
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.34
Gapped
Lambda K H
1.41 0.716 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9628
Number of Sequences: 1807
Number of extensions: 9628
Number of successful extensions: 382
Number of sequences better than 1.0e-20: 1
length of query: 692
length of database: 10,358,551
effective HSP length: 16
effective length of query: 676
effective length of database: 10,329,639
effective search space: 6982835964
effective search space used: 6982835964
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.5 bits)
S1: 12 (24.9 bits)
S2: 49 (100.4 bits)